Bader, Gary D. : rechercher sur Z-Library

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1

A travel guide to Cytoscape plugins

Saito, Rintaro, Smoot, Michael E, Ono, Keiichiro, Ruscheinski, Johannes, Wang, Peng-Liang, Lotia, Samad, Pico, Alexander R, Bader, Gary D, Ideker, Trey

Journal:

Année:

2012

Langue:

english

Fichier:

PDF, 812 KB

english, 2012

2

WordCloud: a Cytoscape plugin to create a visual semantic summary of networks

Layla Oesper, Daniele Merico, Ruth Isserlin, Gary D Bader

Journal:

Source Code for Biology and Medicine

Année:

2011

Langue:

english

Fichier:

PDF, 878 KB

english, 2011

3

Too many roads not taken

Edwards, Aled M., Isserlin, Ruth, Bader, Gary D., Frye, Stephen V., Willson, Timothy M., Yu, Frank H.

Journal:

Année:

2011

Langue:

english

Fichier:

PDF, 504 KB

english, 2011

4

Macrophage activation syndrome in juvenile systemic lupus erythematosus: A multinational multicenter study of thirty-eight patients

Alessandro Parodi, Sergio Davì, Alejandra Beatriz Pringe, Angela Pistorio, Nicolino Ruperto, Silvia Magni-Manzoni, Paivi Miettunen, Brigitte Bader-Meunier, Graciela Espada, Gary Sterba, Seza Ozen, Dow

Journal:

Arthritis & Rheumatism

Année:

2009

Langue:

english

Fichier:

PDF, 101 KB

english, 2009

5

Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry

Ho, Yuen, Gruhler, Albrecht, Heilbut, Adrian, Bader, Gary D., Moore, Lynda, Adams, Sally-Lin, Millar, Anna, Taylor, Paul, Bennett, Keiryn, Boutilier, Kelly

Journal:

Année:

2002

Langue:

english

Fichier:

PDF, 217 KB

english, 2002

6

Effect of exercise on upper and lower extremity endothelial function in patients with coronary artery disease

Noyan Gokce, Joseph A Vita, David S Bader, Debra L Sherman, Liza M Hunter, Monika Holbrook, Carol O’Malley, John F Keaney Jr., Gary J Balady

Journal:

The American Journal of Cardiology

Année:

2002

Langue:

english

Fichier:

PDF, 67 KB

english, 2002

7

[Society of Petroleum Engineers SPE Improved Oil Recovery Symposium - Tulsa, Oklahoma, USA (2014-04-12)] SPE Improved Oil Recovery Symposium - One-Spot Pilot Results in the Sabriyah-Mauddud Carbonate Formation in Kuwait Using a Novel Surfactant Formulation

Carlisle, Charlie, Al-Maraghi, Eissa, Al-Saad, Bader, Britton, Chris, Fortenberry, Robert, Pope, Gary

Langue:

english

Fichier:

PDF, 603 KB

english

8

Properties of atoms in molecules: krypton and xenon and their bonds to nitrogen and fluorine in hydrogen cyanide complexes with noble gas fluorides, HCN-NgF+, NgF+ and NgF2 (Ng = noble gas)

MacDougall, Preston J., Schrobilgen, Gary J., Bader, Richard F. W.

Journal:

Inorganic Chemistry

Année:

1989

Langue:

english

Fichier:

PDF, 2.05 MB

english, 1989

9

Enhanced Differential GPS Carrier-Smoothed Code Processing Using Dual-Frequency Measurements

HWANG, PATRICK Y., MCGRAW, GARY A., BADER, JOHN R.

Journal:

Journal of The Znstitute of Navigation

Année:

1999

Langue:

english

Fichier:

PDF, 665 KB

english, 1999

10

From Bytes to Bedside: Data Integration and Computational Biology for Translational Cancer Research

Mathew, Jomol P., Taylor, Barry S., Bader, Gary D., Pyarajan, Saiju, Antoniotti, Marco, Chinnaiyan, Arul M., Sander, Chris, Burakoff, Steven J., Mishra, Bud

Journal:

PLoS Computational Biology

Année:

2007

Langue:

english

Fichier:

PDF, 423 KB

english, 2007

11

Discovery and Optimization of Imidazopyridine-Based Inhibitors of Diacylglycerol Acyltransferase 2 (DGAT2)

Futatsugi, Kentaro, Kung, Daniel W., Orr, Suvi T. M., Cabral, Shawn, Hepworth, David, Aspnes, Gary, Bader, Scott, Bian, Jianwei, Boehm, Markus, Carpino, Philip A., Coffey, Steven B., Dowling, Matthew

Journal:

Journal of Medicinal Chemistry

Année:

2015

Langue:

english

Fichier:

PDF, 816 KB

english, 2015

12

Functional Genomic Landscape of Human Breast Cancer Drivers, Vulnerabilities, and Resistance

Marcotte, Richard, Sayad, Azin, Brown, Kevin R., Sanchez-Garcia, Felix, Reimand, Jüri, Haider, Maliha, Virtanen, Carl, Bradner, James E., Bader, Gary D., Mills, Gordon B., Pe’er, Dana, Moffat, Jason,

Journal:

Année:

2016

Langue:

english

Fichier:

PDF, 6.14 MB

english, 2016

13

In Memoriam: Albert M. Sacks

Howard Raiffa, Erwin N. Griswold, Clark Byse, Sheldon Oliensis, David L. Shapiro, Norman Dorsen, Gary Bellow, Ruth Bader Ginsburg, Frank Michelman and David B. Wilkins

Journal:

Harvard Law Review

Année:

1991

Langue:

english

Fichier:

PDF, 2.60 MB

english, 1991

14

Randomized Controlled Trial of the Safety and Immunogenicity of Revaccination With Tetanus-Diphtheria-Acellular Pertussis Vaccine (Tdap) in Adults 10 Years After a Previous Dose

Halperin, Scott A, Donovan, Catherine, Marshall, Gary S, Pool, Vitali, Decker, Michael D, Johnson, David R, Greenberg, David P, Bader, Gerald, Weisman, Stuart, Chauhan, Ambaram, Bromberg, Kenneth, McG

Journal:

Journal of the Pediatric Infectious Diseases Society

Année:

2018

Langue:

english

Fichier:

PDF, 354 KB

english, 2018

15

Meta-analysis of gene expression profiles of lean and obese PCOS to identify differentially regulated pathways and risk of comorbidities

Idicula-Thomas, Susan, Gawde, Ulka, Bhaye, Sameeksha, Pokar, Khushal, Bader, Gary D.

Journal:

Computational and Structural Biotechnology Journal

Année:

2020

Fichier:

PDF, 3.78 MB

2020

16

Tempora: Cell trajectory inference using time-series single-cell RNA sequencing data

Tran, Thinh N., Bader, Gary D., Nie, Qing

Journal:

PLoS Computational Biology

Année:

2020

Fichier:

PDF, 5.70 MB

2020

17

Short-term change in dental providers' diagnostic data recording behavior following an educational intervention

James D. Bader, Walter T. McFall Jr., R. Gary Rozier, Darlene H. Sams, Diane L. Ramsey

Journal:

Journal of Continuing Education in the Health Professions

Année:

1989

Langue:

english

Fichier:

PDF, 636 KB

english, 1989

18

Functional genomics of intracellular peptide recognition domains with combinatorial biology methods

Sachdev S Sidhu, Gary D Bader, Charles Boone

Journal:

Current Opinion in Chemical Biology

Année:

2003

Langue:

english

Fichier:

PDF, 147 KB

english, 2003

19

clusterMaker:a multi-algorithm clustering plugin for Cytoscape

John H Morris, Leonard Apeltsin, Aaron M Newman, Jan Baumbach, Tobias Wittkop, Gang Su, Gary D Bader, Thomas E Ferrin

Journal:

BMC Bioinformatics

Année:

2011

Langue:

english

Fichier:

PDF, 5.02 MB

english, 2011

20

Broadening the horizon – level 2.5 of the HUPO-PSI format for molecular interactions

Samuel Kerrien, Sandra Orchard, Luisa Montecchi-Palazzi, Bruno Aranda, Antony F Quinn, Nisha Vinod, Gary D Bader, Ioannis Xenarios, Jérôme Wojcik, David Sherman, Mike Tyers, John J Salama, Susan Moore

Journal:

Année:

2007

Langue:

english

Fichier:

PDF, 1.53 MB

english, 2007

21

Pathway analysis of dilated cardiomyopathy using global proteomic profiling and enrichment maps

Ruth Isserlin, Daniele Merico, Rasoul Alikhani-Koupaei, Anthony Gramolini, Gary D. Bader, Andrew Emili

Journal:

Année:

2010

Langue:

english

Fichier:

PDF, 777 KB

english, 2010

22

Pathway analysis of dilated cardiomyopathy using global proteomic profiling and enrichment maps

Ruth Isserlin, Daniele Merico, Rasoul Alikhani-Koupaei, Anthony Gramolini, Gary D. Bader, Andrew Emili

Journal:

PROTEOMICS - Clinical Applications

Année:

2010

Langue:

english

Fichier:

PDF, 699 KB

english, 2010

23

Computational Prediction of Protein–Protein Interactions

Lucy Skrabanek, Harpreet K. Saini, Gary D. Bader, Anton J. Enright

Journal:

Molecular Biotechnology

Année:

2008

Langue:

english

Fichier:

PDF, 1.43 MB

english, 2008

24

Dental patients'knowledge and beliefs about periodontal disease

James D. Bader, R. Gary Rozier, Walter T. McFall, Diane L. Ramsey

Journal:

Community Dentistry and Oral Epidemiology

Année:

1989

Langue:

english

Fichier:

PDF, 4.37 MB

english, 1989

25

Association of dental health knowledge with periodontal conditions among regular patients

James D. Bader, R. Gary Rozier, Walter T. McFall Jr., Diane L. Ramsey

Journal:

Community Dentistry and Oral Epidemiology

Année:

1990

Langue:

english

Fichier:

PDF, 4.98 MB

english, 1990

26

Relationship between epidemiologic coronal caries assessments and practitioners' treatment recommendations in adults

James D. Bader, Daniel A. Shugars, R. Gary Rozier

Journal:

Community Dentistry and Oral Epidemiology

Année:

1993

Langue:

english

Fichier:

PDF, 5.77 MB

english, 1993

27

How to visually interpret biological data using networks

Gfeller, David, Merico, Daniele, Bader, Gary D

Journal:

Nature Biotechnology

Année:

2009

Langue:

english

Fichier:

PDF, 355 KB

english, 2009

28

Analyzing yeast protein–protein interaction data obtained from different sources

Bader, Gary D., Hogue, Christopher W.V.

Journal:

Nature Biotechnology

Année:

2002

Langue:

english

Fichier:

PDF, 625 KB

english, 2002

29

Playing tag with the yeast proteome

Andrews, Brenda J, Bader, Gary D, Boone, Charles

Journal:

Nature Biotechnology

Année:

2003

Langue:

english

Fichier:

PDF, 152 KB

english, 2003

30

The HUPO PSI's Molecular Interaction format—a community standard for the representation of protein interaction data

Hermjakob, Henning, Montecchi-Palazzi, Luisa, Bader, Gary, Wojcik, Jérôme, Salwinski, Lukasz, Ceol, Arnaud, Moore, Susan, Orchard, Sandra, Sarkans, Ugis, von Mering, Christian

Journal:

Nature Biotechnology

Année:

2004

Langue:

english

Fichier:

PDF, 1.49 MB

english, 2004

31

A predictive model for drug bioaccumulation and bioactivity in Caenorhabditis elegans

Burns, Andrew R, Wallace, Iain M, Wildenhain, Jan, Tyers, Mike, Giaever, Guri, Bader, Gary D, Nislow, Corey, Cutler, Sean R, Roy, Peter J

Journal:

Nature Chemical Biology

Année:

2010

Langue:

english

Fichier:

PDF, 872 KB

english, 2010

32

Phosphorylation sites of higher stoichiometry are more conserved

Tan, Chris Soon Heng, Bader, Gary D

Journal:

Année:

2012

Langue:

english

Fichier:

PDF, 263 KB

english, 2012

33

A Comparative Transcriptomic Analysis Reveals Conserved Features of Stem Cell Pluripotency in Planarians and Mammals

Roselyne M. Labbé, Manuel Irimia, Ko W. Currie, Alexander Lin, Shu Jun Zhu, David D.R. Brown, Eric J. Ross, Veronique Voisin, Gary D. Bader, Benjamin J. Blencowe, Bret J. Pearson

Journal:

Année:

2012

Langue:

english

Fichier:

PDF, 1.97 MB

english, 2012

34

Comparison of ramp versus step protocols for exercise testing in patients ≥60 years of age

David S Bader, Thomas E Maguire, Gary J Balady

Journal:

The American Journal of Cardiology

Année:

1999

Langue:

english

Fichier:

PDF, 69 KB

english, 1999

35

Comparison of cardiopulmonary responses in obese women using ramp versus step treadmill protocols

Kyle J McInnis, David S Bader, Gary L Pierce, Gary J Balady

Journal:

The American Journal of Cardiology

Année:

1999

Langue:

english

Fichier:

PDF, 64 KB

english, 1999

36

Accuracy of a pretest questionnaire in exercise test protocol selection

David S Bader, Kyle J McInnis, Thomas E Maguire, Gary L Pierce, Gary J Balady

Journal:

The American Journal of Cardiology

Année:

2000

Langue:

english

Fichier:

PDF, 157 KB

english, 2000

37

Functional genomics and proteomics: charting a multidimensional map of the yeast cell

Gary D. Bader, Adrian Heilbut, Brenda Andrews, Mike Tyers, Timothy Hughes, Charles Boone

Journal:

Trends in Cell Biology

Année:

2003

Langue:

english

Fichier:

PDF, 3.99 MB

english, 2003

38

An improved method for scoring protein-protein interactions using semantic similarity within the gene ontology

Shobhit Jain, Gary D Bader

Journal:

BMC Bioinformatics

Année:

2010

Langue:

english

Fichier:

PDF, 1.38 MB

english, 2010

39

SeqHound: biological sequence and structure database as a platform for bioinformatics research

Katerina Michalickova, Gary D Bader, Michel Dumontier, Hao Lieu, Doron Betel, Ruth Isserlin, Christopher WV Hogue

Journal:

BMC Bioinformatics

Année:

2002

Langue:

english

Fichier:

PDF, 342 KB

english, 2002

40

An automated method for finding molecular complexes in large protein interaction networks

Gary D Bader, Christopher WV Hogue

Journal:

BMC Bioinformatics

Année:

2003

Langue:

english

Fichier:

PDF, 674 KB

english, 2003

41

PreBIND and Textomy – mining the biomedical literature for protein-protein interactions using a support vector machine

Ian Donaldson, Joel Martin, Berry de Bruijn, Cheryl Wolting, Vicki Lay, Brigitte Tuekam, Shudong Zhang, Berivan Baskin, Gary D Bader, Katerina Michalickova, Tony Pawson, Christopher WV Hogue

Journal:

BMC Bioinformatics

Année:

2003

Langue:

english

Fichier:

PDF, 574 KB

english, 2003

42

cPath: open source software for collecting, storing, and querying biological pathways

Ethan G Cerami, Gary D Bader, Benjamin E Gross, Chris Sander

Journal:

BMC Bioinformatics

Année:

2006

Langue:

english

Fichier:

PDF, 853 KB

english, 2006

43

Effect of crown margins on periodontal conditions in regularly attending patients

James D. Bader, R. Gary Rozier, Walter T. McFall Jr., Diane L. Ramsey

Journal:

The Journal of Prosthetic Dentistry

Année:

1991

Langue:

english

Fichier:

PDF, 540 KB

english, 1991

44

Physicians' roles in preventing dental caries in preschool children: A summary of the evidence for the U.S. Preventive Services Task Force

James D Bader, R.Gary Rozier, Kathleen N Lohr, Paul S Frame

Journal:

American Journal of Preventive Medicine

Année:

2004

Langue:

english

Fichier:

PDF, 149 KB

english, 2004

45

Pathway information for systems biology

Michael P. Cary, Gary D. Bader, Chris Sander

Journal:

Année:

2005

Langue:

english

Fichier:

PDF, 289 KB

english, 2005

46

Domain-mediated protein interaction prediction: From genome to network

Jüri Reimand, Shirley Hui, Shobhit Jain, Brian Law, Gary D. Bader

Journal:

Année:

2012

Langue:

english

Fichier:

PDF, 946 KB

english, 2012

47

Predicting pregnancy outcome in a medicaid population

Thomas J. Bader, Gary Klein, Jennifer Lauby, Richard A. Baron

Journal:

Obstetrics & Gynecology

Année:

2002

Langue:

english

Fichier:

PDF, 50 KB

english, 2002

48

Serotonin Regulates Mammary Gland Development via an Autocrine-Paracrine Loop

Manabu Matsuda, Tatsuhiko Imaoka, Archie J Vomachka, Gary A Gudelsky, Zhaoyuan Hou, Meenakshi Mistry, Jason P Bailey, Kathryn M Nieport, Diego J Walther, Michael Bader, Nelson D Horseman

Journal:

Developmental Cell

Année:

2004

Langue:

english

Fichier:

PDF, 591 KB

english, 2004

49

Computational prediction of cancer-gene function

Hu, Pingzhao, Bader, Gary, Wigle, Dennis A., Emili, Andrew

Journal:

Nature Reviews Cancer

Année:

2007

Langue:

english

Fichier:

PDF, 933 KB

english, 2007

50

Proteome scanning to predict PDZ domain interactions using support vector machines

Shirley Hui, Gary D Bader

Journal:

BMC Bioinformatics

Année:

2010

Langue:

english

Fichier:

PDF, 1.16 MB

english, 2010